Protein–RNA interactions for Protein: P27352

GIF, Gastric intrinsic factor, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIFP27352 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GIFP27352 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
GIFP27352 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GIFP27352 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GIFP27352 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.67■□□□□ 0.1
GIFP27352 AL357033.4-201ENST00000617703 1807 ntBASIC15.67■□□□□ 0.1
GIFP27352 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GIFP27352 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.67■□□□□ 0.1
GIFP27352 MIR3917-201ENST00000580971 93 ntBASIC15.67■□□□□ 0.1
GIFP27352 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.67■□□□□ 0.1
GIFP27352 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GIFP27352 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 HOXB1-202ENST00000577092 1414 ntBASIC15.67■□□□□ 0.1
GIFP27352 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GIFP27352 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GIFP27352 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.67■□□□□ 0.1
GIFP27352 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.67■□□□□ 0.1
GIFP27352 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.66■□□□□ 0.1
GIFP27352 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.66■□□□□ 0.1
GIFP27352 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.66■□□□□ 0.1
GIFP27352 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.66■□□□□ 0.1
GIFP27352 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 RCC2P3-201ENST00000418112 1537 ntBASIC15.66■□□□□ 0.1
GIFP27352 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.66■□□□□ 0.1
GIFP27352 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GIFP27352 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GIFP27352 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
GIFP27352 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.65■□□□□ 0.1
GIFP27352 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.65■□□□□ 0.1
GIFP27352 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 HLA-F-220ENST00000434407 884 ntBASIC15.65■□□□□ 0.1
GIFP27352 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GIFP27352 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
GIFP27352 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.65■□□□□ 0.1
GIFP27352 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GIFP27352 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GIFP27352 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GIFP27352 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms