Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT4P19013 AC046185.3-201ENST00000623228 1824 ntBASIC17.62■□□□□ 0.41
KRT4P19013 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT4P19013 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT4P19013 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KRT4P19013 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT4P19013 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT4P19013 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT4P19013 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT4P19013 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT4P19013 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KRT4P19013 NFIC-211ENST00000641145 8399 ntBASIC17.62■□□□□ 0.41
KRT4P19013 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
KRT4P19013 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT4P19013 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT4P19013 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.61■□□□□ 0.41
KRT4P19013 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT4P19013 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT4P19013 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KRT4P19013 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT4P19013 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT4P19013 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
KRT4P19013 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KRT4P19013 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.6■□□□□ 0.41
KRT4P19013 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
KRT4P19013 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 EGLN1P1-201ENST00000531623 762 ntBASIC17.6■□□□□ 0.41
KRT4P19013 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
KRT4P19013 NEK4P2-201ENST00000580004 1012 ntBASIC17.6■□□□□ 0.41
KRT4P19013 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
KRT4P19013 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KRT4P19013 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT4P19013 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 AL603756.1-201ENST00000606511 2163 ntBASIC17.59■□□□□ 0.41
KRT4P19013 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT4P19013 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT4P19013 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT4P19013 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT4P19013 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT4P19013 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT4P19013 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
KRT4P19013 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT4P19013 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KRT4P19013 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms