Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COX4I1P13073 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COX4I1P13073 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COX4I1P13073 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 AC092338.2-201ENST00000568827 1415 ntBASIC16.91■□□□□ 0.3
COX4I1P13073 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COX4I1P13073 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.91■□□□□ 0.3
COX4I1P13073 SLC25A1P3-201ENST00000395415 828 ntBASIC16.91■□□□□ 0.3
COX4I1P13073 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
COX4I1P13073 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 AC113404.2-201ENST00000507884 177 ntBASIC16.91■□□□□ 0.3
COX4I1P13073 BX088651.1-201ENST00000540551 451 ntBASIC16.91■□□□□ 0.3
COX4I1P13073 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.91■□□□□ 0.3
COX4I1P13073 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
COX4I1P13073 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COX4I1P13073 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COX4I1P13073 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.91■□□□□ 0.3
COX4I1P13073 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 AC079328.2-201ENST00000561241 3354 ntBASIC16.9■□□□□ 0.3
COX4I1P13073 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.9■□□□□ 0.3
COX4I1P13073 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.9■□□□□ 0.3
COX4I1P13073 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 AL139327.4-201ENST00000612362 153 ntBASIC16.9■□□□□ 0.3
COX4I1P13073 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
COX4I1P13073 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COX4I1P13073 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.9■□□□□ 0.3
COX4I1P13073 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.3
COX4I1P13073 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.3
COX4I1P13073 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
COX4I1P13073 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.89■□□□□ 0.3
COX4I1P13073 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COX4I1P13073 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COX4I1P13073 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.89■□□□□ 0.29
COX4I1P13073 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COX4I1P13073 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
COX4I1P13073 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COX4I1P13073 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.89■□□□□ 0.29
COX4I1P13073 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.89■□□□□ 0.29
COX4I1P13073 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.89■□□□□ 0.29
COX4I1P13073 AC024243.1-201ENST00000609234 778 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms