Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UBCP0CG48 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 AL023973.1-201ENST00000624619 620 ntBASIC15.41■□□□□ 0.06
UBCP0CG48 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.41■□□□□ 0.06
UBCP0CG48 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
UBCP0CG48 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBCP0CG48 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UBCP0CG48 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 LIN28AP1-201ENST00000429574 405 ntBASIC15.4■□□□□ 0.06
UBCP0CG48 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 AC079602.3-201ENST00000623931 403 ntBASIC15.4■□□□□ 0.06
UBCP0CG48 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.4■□□□□ 0.06
UBCP0CG48 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.4■□□□□ 0.06
UBCP0CG48 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBCP0CG48 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.4■□□□□ 0.06
UBCP0CG48 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
UBCP0CG48 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.39■□□□□ 0.05
UBCP0CG48 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
UBCP0CG48 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.39■□□□□ 0.05
UBCP0CG48 LYSMD4-203ENST00000378904 2122 ntBASIC15.39■□□□□ 0.05
UBCP0CG48 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.39■□□□□ 0.05
UBCP0CG48 HLA-F-220ENST00000434407 884 ntBASIC15.39■□□□□ 0.05
UBCP0CG48 SLC25A3P1-201ENST00000443844 931 ntBASIC15.39■□□□□ 0.05
UBCP0CG48 ATP5G1P1-201ENST00000448724 379 ntBASIC15.39■□□□□ 0.05
UBCP0CG48 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
UBCP0CG48 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.39■□□□□ 0.05
UBCP0CG48 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBCP0CG48 LINC01311-201ENST00000565162 1445 ntBASIC15.39■□□□□ 0.05
UBCP0CG48 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms