Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
CLTAP09496 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLTAP09496 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.18■□□□□ 0.66
CLTAP09496 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLTAP09496 AL160237.2-201ENST00000556165 472 ntBASIC19.18■□□□□ 0.66
CLTAP09496 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.18■□□□□ 0.66
CLTAP09496 AD001527.2-201ENST00000622994 785 ntBASIC19.18■□□□□ 0.66
CLTAP09496 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.18■□□□□ 0.66
CLTAP09496 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 SIRPAP1-201ENST00000448467 1770 ntBASIC19.18■□□□□ 0.66
CLTAP09496 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.18■□□□□ 0.66
CLTAP09496 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLTAP09496 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLTAP09496 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLTAP09496 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.18■□□□□ 0.66
CLTAP09496 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.18■□□□□ 0.66
CLTAP09496 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 AC134043.2-201ENST00000624206 2238 ntBASIC19.17■□□□□ 0.66
CLTAP09496 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
CLTAP09496 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
CLTAP09496 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLTAP09496 AC026396.1-201ENST00000419388 421 ntBASIC19.17■□□□□ 0.66
CLTAP09496 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CLTAP09496 FGFR3P6-201ENST00000457012 610 ntBASIC19.17■□□□□ 0.66
CLTAP09496 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.17■□□□□ 0.66
CLTAP09496 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.17■□□□□ 0.66
CLTAP09496 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.17■□□□□ 0.66
CLTAP09496 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.17■□□□□ 0.66
CLTAP09496 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 AL049757.1-201ENST00000616842 1596 ntBASIC19.17■□□□□ 0.66
CLTAP09496 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.17■□□□□ 0.66
CLTAP09496 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.17■□□□□ 0.66
CLTAP09496 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLTAP09496 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.16■□□□□ 0.66
CLTAP09496 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.16■□□□□ 0.66
CLTAP09496 PMPCAP1-201ENST00000508114 1576 ntBASIC19.16■□□□□ 0.66
CLTAP09496 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.16■□□□□ 0.66
CLTAP09496 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.16■□□□□ 0.66
CLTAP09496 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.16■□□□□ 0.66
CLTAP09496 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 AC019129.2-201ENST00000609837 1235 ntBASIC19.16■□□□□ 0.66
CLTAP09496 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.16■□□□□ 0.66
CLTAP09496 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLTAP09496 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 GNAS-203ENST00000306120 1878 ntBASIC19.16■□□□□ 0.66
CLTAP09496 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
CLTAP09496 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLTAP09496 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CLTAP09496 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLTAP09496 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLTAP09496 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.15■□□□□ 0.66
CLTAP09496 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLTAP09496 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.15■□□□□ 0.66
CLTAP09496 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLTAP09496 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLTAP09496 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.15■□□□□ 0.66
CLTAP09496 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLTAP09496 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms