Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
CTSDP07339 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTSDP07339 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CTSDP07339 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.57□□□□□ -0.08
CTSDP07339 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.57□□□□□ -0.08
CTSDP07339 AC024243.1-201ENST00000609234 778 ntBASIC14.57□□□□□ -0.08
CTSDP07339 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
CTSDP07339 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 AC116562.4-202ENST00000641738 218 ntBASIC14.57□□□□□ -0.08
CTSDP07339 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.57□□□□□ -0.08
CTSDP07339 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 AL162727.3-201ENST00000635661 2787 ntBASIC14.57□□□□□ -0.08
CTSDP07339 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSDP07339 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
CTSDP07339 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
CTSDP07339 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSDP07339 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 AC007663.1-201ENST00000438948 1240 ntBASIC14.56□□□□□ -0.08
CTSDP07339 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.56□□□□□ -0.08
CTSDP07339 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.56□□□□□ -0.08
CTSDP07339 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.56□□□□□ -0.08
CTSDP07339 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 AP001412.1-201ENST00000608405 714 ntBASIC14.56□□□□□ -0.08
CTSDP07339 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CTSDP07339 AP006294.2-201ENST00000641667 209 ntBASIC14.56□□□□□ -0.08
CTSDP07339 AC092865.7-201ENST00000641832 219 ntBASIC14.56□□□□□ -0.08
CTSDP07339 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSDP07339 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.56□□□□□ -0.08
CTSDP07339 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms