Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APPP05067 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APPP05067 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
APPP05067 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
APPP05067 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.04■□□□□ 0.96
APPP05067 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
APPP05067 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
APPP05067 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
APPP05067 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
APPP05067 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 RBM17P3-201ENST00000417687 1192 ntBASIC21.04■□□□□ 0.96
APPP05067 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.04■□□□□ 0.96
APPP05067 IGHV3-52-201ENST00000519770 353 ntBASIC21.04■□□□□ 0.96
APPP05067 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.04■□□□□ 0.96
APPP05067 AL121912.1-201ENST00000603683 238 ntBASIC21.04■□□□□ 0.96
APPP05067 AL355877.3-201ENST00000622820 899 ntBASIC21.04■□□□□ 0.96
APPP05067 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.04■□□□□ 0.96
APPP05067 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.04■□□□□ 0.96
APPP05067 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
APPP05067 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 AL355312.1-201ENST00000407115 2176 ntBASIC21.04■□□□□ 0.96
APPP05067 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APPP05067 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.04■□□□□ 0.96
APPP05067 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.04■□□□□ 0.96
APPP05067 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
APPP05067 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
APPP05067 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
APPP05067 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.03■□□□□ 0.96
APPP05067 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 AC019129.2-201ENST00000609837 1235 ntBASIC21.03■□□□□ 0.96
APPP05067 AD001527.2-201ENST00000622994 785 ntBASIC21.03■□□□□ 0.96
APPP05067 AP000867.4-201ENST00000641616 219 ntBASIC21.03■□□□□ 0.96
APPP05067 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
APPP05067 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
APPP05067 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.03■□□□□ 0.96
APPP05067 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APPP05067 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
APPP05067 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.02■□□□□ 0.96
APPP05067 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
APPP05067 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.02■□□□□ 0.96
APPP05067 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
APPP05067 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 AC068880.1-201ENST00000507289 2297 ntBASIC21.02■□□□□ 0.96
APPP05067 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
APPP05067 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
APPP05067 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
APPP05067 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.02■□□□□ 0.96
APPP05067 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.02■□□□□ 0.96
APPP05067 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
APPP05067 AC073592.5-201ENST00000624854 528 ntBASIC21.02■□□□□ 0.96
APPP05067 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
APPP05067 AC067852.2-201ENST00000590513 2313 ntBASIC21.02■□□□□ 0.96
APPP05067 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APPP05067 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
APPP05067 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.02■□□□□ 0.96
APPP05067 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
APPP05067 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
APPP05067 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
APPP05067 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
APPP05067 PMPCAP1-201ENST00000508114 1576 ntBASIC21.02■□□□□ 0.95
APPP05067 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
APPP05067 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.01■□□□□ 0.95
APPP05067 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.01■□□□□ 0.95
APPP05067 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APPP05067 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APPP05067 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms