Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD3DP04234 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.9□□□□□ -0.02
CD3DP04234 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.9□□□□□ -0.02
CD3DP04234 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD3DP04234 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 HYMAI-201ENST00000635591 3347 ntBASIC14.9□□□□□ -0.02
CD3DP04234 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD3DP04234 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.9□□□□□ -0.02
CD3DP04234 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD3DP04234 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CD3DP04234 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.89□□□□□ -0.03
CD3DP04234 AC132872.4-202ENST00000622924 2756 ntBASIC14.89□□□□□ -0.03
CD3DP04234 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.89□□□□□ -0.03
CD3DP04234 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD3DP04234 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD3DP04234 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CD3DP04234 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CD3DP04234 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD3DP04234 AC078925.2-201ENST00000624013 1973 ntBASIC14.89□□□□□ -0.03
CD3DP04234 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD3DP04234 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 LINC02012-201ENST00000608206 1725 ntBASIC14.89□□□□□ -0.03
CD3DP04234 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD3DP04234 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 LINC00554-201ENST00000564841 3011 ntBASIC14.88□□□□□ -0.03
CD3DP04234 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 ESRRAP1-201ENST00000400596 1257 ntBASIC14.88□□□□□ -0.03
CD3DP04234 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.88□□□□□ -0.03
CD3DP04234 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 AP003041.3-201ENST00000527151 707 ntBASIC14.88□□□□□ -0.03
CD3DP04234 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.88□□□□□ -0.03
CD3DP04234 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.88□□□□□ -0.03
CD3DP04234 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.88□□□□□ -0.03
CD3DP04234 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CD3DP04234 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.88□□□□□ -0.03
CD3DP04234 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 LINC01311-201ENST00000565162 1445 ntBASIC14.88□□□□□ -0.03
CD3DP04234 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.88□□□□□ -0.03
CD3DP04234 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.88□□□□□ -0.03
CD3DP04234 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.88□□□□□ -0.03
CD3DP04234 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD3DP04234 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms