Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.4■□□□□ 0.22
OPN1SWP03999 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
OPN1SWP03999 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.4■□□□□ 0.22
OPN1SWP03999 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
OPN1SWP03999 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
OPN1SWP03999 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.39■□□□□ 0.21
OPN1SWP03999 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.39■□□□□ 0.21
OPN1SWP03999 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.39■□□□□ 0.21
OPN1SWP03999 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.39■□□□□ 0.21
OPN1SWP03999 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.39■□□□□ 0.21
OPN1SWP03999 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
OPN1SWP03999 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.39■□□□□ 0.21
OPN1SWP03999 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
OPN1SWP03999 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
OPN1SWP03999 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
OPN1SWP03999 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPN1SWP03999 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
OPN1SWP03999 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
OPN1SWP03999 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 AP003733.1-201ENST00000491725 852 ntBASIC16.38■□□□□ 0.21
OPN1SWP03999 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
OPN1SWP03999 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.38■□□□□ 0.21
OPN1SWP03999 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.38■□□□□ 0.21
OPN1SWP03999 AC011558.1-201ENST00000623459 338 ntBASIC16.38■□□□□ 0.21
OPN1SWP03999 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.38■□□□□ 0.21
OPN1SWP03999 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.38■□□□□ 0.21
OPN1SWP03999 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
OPN1SWP03999 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPN1SWP03999 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
OPN1SWP03999 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.37■□□□□ 0.21
OPN1SWP03999 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 IGHGP-201ENST00000390555 1178 ntBASIC16.37■□□□□ 0.21
OPN1SWP03999 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms