Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA1P02708 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.96■□□□□ 0.63
CHRNA1P02708 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 RFPL4AP1-201ENST00000530883 850 ntBASIC18.96■□□□□ 0.63
CHRNA1P02708 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHRNA1P02708 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA1P02708 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHRNA1P02708 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA1P02708 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.95■□□□□ 0.62
CHRNA1P02708 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.95■□□□□ 0.62
CHRNA1P02708 FAM185BP-201ENST00000443595 716 ntBASIC18.95■□□□□ 0.62
CHRNA1P02708 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.95■□□□□ 0.62
CHRNA1P02708 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 AC027612.4-201ENST00000605371 583 ntBASIC18.95■□□□□ 0.62
CHRNA1P02708 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA1P02708 AC091812.2-201ENST00000619081 385 ntBASIC18.95■□□□□ 0.62
CHRNA1P02708 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA1P02708 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA1P02708 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA1P02708 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CHRNA1P02708 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CHRNA1P02708 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHRNA1P02708 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA1P02708 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHRNA1P02708 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHRNA1P02708 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA1P02708 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHRNA1P02708 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHRNA1P02708 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
CHRNA1P02708 PAWRP1-201ENST00000451083 565 ntBASIC18.94■□□□□ 0.62
CHRNA1P02708 CYMP-203ENST00000474680 1263 ntBASIC18.94■□□□□ 0.62
CHRNA1P02708 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 AP002472.1-201ENST00000577490 586 ntBASIC18.94■□□□□ 0.62
CHRNA1P02708 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA1P02708 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA1P02708 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA1P02708 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA1P02708 AC092902.6-201ENST00000641783 218 ntBASIC18.94■□□□□ 0.62
CHRNA1P02708 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA1P02708 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CHRNA1P02708 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA1P02708 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA1P02708 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHRNA1P02708 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHRNA1P02708 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA1P02708 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA1P02708 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA1P02708 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms