Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTDNEP1O95476 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.27■□□□□ 0.84
CTDNEP1O95476 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.27■□□□□ 0.84
CTDNEP1O95476 AC093458.2-201ENST00000623150 629 ntBASIC20.27■□□□□ 0.84
CTDNEP1O95476 AC073592.5-201ENST00000624854 528 ntBASIC20.27■□□□□ 0.84
CTDNEP1O95476 AP000867.4-201ENST00000641616 219 ntBASIC20.27■□□□□ 0.84
CTDNEP1O95476 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTDNEP1O95476 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.27■□□□□ 0.84
CTDNEP1O95476 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CTDNEP1O95476 LINC02012-201ENST00000608206 1725 ntBASIC20.27■□□□□ 0.83
CTDNEP1O95476 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CTDNEP1O95476 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.27■□□□□ 0.83
CTDNEP1O95476 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.27■□□□□ 0.83
CTDNEP1O95476 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTDNEP1O95476 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.27■□□□□ 0.83
CTDNEP1O95476 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 AC104819.1-201ENST00000504587 486 ntBASIC20.26■□□□□ 0.83
CTDNEP1O95476 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 AC099336.1-202ENST00000602961 463 ntBASIC20.26■□□□□ 0.83
CTDNEP1O95476 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 AC148477.5-201ENST00000625164 1645 ntBASIC20.26■□□□□ 0.83
CTDNEP1O95476 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTDNEP1O95476 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTDNEP1O95476 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CTDNEP1O95476 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 NKILA-202ENST00000614771 2598 ntBASIC20.24■□□□□ 0.83
CTDNEP1O95476 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 POM121L3P-201ENST00000419331 1163 ntBASIC20.24■□□□□ 0.83
CTDNEP1O95476 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 STK19B-204ENST00000512515 211 ntBASIC20.24■□□□□ 0.83
CTDNEP1O95476 MIR5100-201ENST00000579544 119 ntBASIC20.24■□□□□ 0.83
CTDNEP1O95476 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTDNEP1O95476 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
CTDNEP1O95476 AL121761.2-201ENST00000598007 1648 ntBASIC20.24■□□□□ 0.83
CTDNEP1O95476 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTDNEP1O95476 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTDNEP1O95476 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTDNEP1O95476 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTDNEP1O95476 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms