Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIX6O95475 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.72□□□□□ -0.05
SIX6O95475 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIX6O95475 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 AC046185.3-201ENST00000623228 1824 ntBASIC14.71□□□□□ -0.05
SIX6O95475 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 LYSMD4-203ENST00000378904 2122 ntBASIC14.71□□□□□ -0.05
SIX6O95475 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.71□□□□□ -0.05
SIX6O95475 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.71□□□□□ -0.05
SIX6O95475 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SIX6O95475 KRT18P5-201ENST00000436075 1291 ntBASIC14.71□□□□□ -0.05
SIX6O95475 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.71□□□□□ -0.05
SIX6O95475 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.71□□□□□ -0.05
SIX6O95475 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SIX6O95475 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.71□□□□□ -0.05
SIX6O95475 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIX6O95475 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.71□□□□□ -0.05
SIX6O95475 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.71□□□□□ -0.06
SIX6O95475 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIX6O95475 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIX6O95475 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIX6O95475 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIX6O95475 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 AC063926.3-201ENST00000624734 5658 ntBASIC14.7□□□□□ -0.06
SIX6O95475 AC144831.1-201ENST00000573312 2656 ntBASIC14.7□□□□□ -0.06
SIX6O95475 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.7□□□□□ -0.06
SIX6O95475 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.7□□□□□ -0.06
SIX6O95475 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.7□□□□□ -0.06
SIX6O95475 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.7□□□□□ -0.06
SIX6O95475 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 MCCD1P1-208ENST00000445732 328 ntBASIC14.7□□□□□ -0.06
SIX6O95475 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.7□□□□□ -0.06
SIX6O95475 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.7□□□□□ -0.06
SIX6O95475 AC060766.5-201ENST00000590539 871 ntBASIC14.7□□□□□ -0.06
SIX6O95475 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.7□□□□□ -0.06
SIX6O95475 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 GPAT2P1-201ENST00000444924 1672 ntBASIC14.7□□□□□ -0.06
SIX6O95475 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.7□□□□□ -0.06
SIX6O95475 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.7□□□□□ -0.06
SIX6O95475 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.7□□□□□ -0.06
SIX6O95475 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIX6O95475 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 AL024508.2-201ENST00000607749 1894 ntBASIC14.69□□□□□ -0.06
SIX6O95475 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 AC009949.1-201ENST00000623048 1830 ntBASIC14.69□□□□□ -0.06
SIX6O95475 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SIX6O95475 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.69□□□□□ -0.06
SIX6O95475 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms