Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX3O95343 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SIX3O95343 COX5BP2-201ENST00000392354 334 ntBASIC17.14■□□□□ 0.33
SIX3O95343 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX3O95343 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX3O95343 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SIX3O95343 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SIX3O95343 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SIX3O95343 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 AC097374.2-201ENST00000618617 1306 ntBASIC17.14■□□□□ 0.33
SIX3O95343 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX3O95343 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX3O95343 AC116353.5-201ENST00000638148 1699 ntBASIC17.13■□□□□ 0.33
SIX3O95343 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SIX3O95343 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.13■□□□□ 0.33
SIX3O95343 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 TSPY22P-201ENST00000427496 604 ntBASIC17.13■□□□□ 0.33
SIX3O95343 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.13■□□□□ 0.33
SIX3O95343 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.13■□□□□ 0.33
SIX3O95343 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SIX3O95343 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.13■□□□□ 0.33
SIX3O95343 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIX3O95343 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SIX3O95343 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 AC106886.4-201ENST00000623557 2502 ntBASIC17.12■□□□□ 0.33
SIX3O95343 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.12■□□□□ 0.33
SIX3O95343 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SIX3O95343 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.12■□□□□ 0.33
SIX3O95343 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.12■□□□□ 0.33
SIX3O95343 AC007967.3-201ENST00000434308 558 ntBASIC17.12■□□□□ 0.33
SIX3O95343 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.12■□□□□ 0.33
SIX3O95343 RN7SL606P-201ENST00000472779 293 ntBASIC17.12■□□□□ 0.33
SIX3O95343 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.12■□□□□ 0.33
SIX3O95343 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.12■□□□□ 0.33
SIX3O95343 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.12■□□□□ 0.33
SIX3O95343 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.12■□□□□ 0.33
SIX3O95343 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.12■□□□□ 0.33
SIX3O95343 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.12■□□□□ 0.33
SIX3O95343 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIX3O95343 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.12■□□□□ 0.33
SIX3O95343 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.11■□□□□ 0.33
SIX3O95343 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIX3O95343 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms