Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VAPBO95292 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.63■□□□□ 0.41
VAPBO95292 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 FAM86EP-206ENST00000510506 987 ntBASIC17.63■□□□□ 0.41
VAPBO95292 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 AC125634.1-201ENST00000438758 1403 ntBASIC17.63■□□□□ 0.41
VAPBO95292 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPBO95292 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPBO95292 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VAPBO95292 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VAPBO95292 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 AC084018.2-201ENST00000613093 2607 ntBASIC17.62■□□□□ 0.41
VAPBO95292 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 BX276092.5-203ENST00000456199 560 ntBASIC17.62■□□□□ 0.41
VAPBO95292 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.62■□□□□ 0.41
VAPBO95292 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.62■□□□□ 0.41
VAPBO95292 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.62■□□□□ 0.41
VAPBO95292 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VAPBO95292 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAPBO95292 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VAPBO95292 AC124067.4-201ENST00000519691 2379 ntBASIC17.61■□□□□ 0.41
VAPBO95292 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
VAPBO95292 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VAPBO95292 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 AC002558.1-201ENST00000488906 803 ntBASIC17.61■□□□□ 0.41
VAPBO95292 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.61■□□□□ 0.41
VAPBO95292 AC005336.2-201ENST00000593183 939 ntBASIC17.61■□□□□ 0.41
VAPBO95292 AL138831.2-201ENST00000606564 490 ntBASIC17.61■□□□□ 0.41
VAPBO95292 AL139327.4-201ENST00000612362 153 ntBASIC17.61■□□□□ 0.41
VAPBO95292 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VAPBO95292 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VAPBO95292 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
VAPBO95292 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VAPBO95292 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAPBO95292 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms