Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.88■■□□□ 1.09
CACNA1FO60840 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.88■■□□□ 1.09
CACNA1FO60840 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.88■■□□□ 1.09
CACNA1FO60840 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.88■■□□□ 1.09
CACNA1FO60840 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.88■■□□□ 1.09
CACNA1FO60840 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.88■■□□□ 1.09
CACNA1FO60840 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CACNA1FO60840 IGHV3-65-201ENST00000523210 341 ntBASIC21.88■■□□□ 1.09
CACNA1FO60840 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 AC027601.4-201ENST00000611259 610 ntBASIC21.88■■□□□ 1.09
CACNA1FO60840 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.88■■□□□ 1.09
CACNA1FO60840 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CACNA1FO60840 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.88■■□□□ 1.09
CACNA1FO60840 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.87■■□□□ 1.09
CACNA1FO60840 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.87■■□□□ 1.09
CACNA1FO60840 AC107918.2-201ENST00000530817 355 ntBASIC21.87■■□□□ 1.09
CACNA1FO60840 DUX4L17-201ENST00000557360 1267 ntBASIC21.87■■□□□ 1.09
CACNA1FO60840 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.87■■□□□ 1.09
CACNA1FO60840 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CACNA1FO60840 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.87■■□□□ 1.09
CACNA1FO60840 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CACNA1FO60840 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.87■■□□□ 1.09
CACNA1FO60840 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CACNA1FO60840 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CACNA1FO60840 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CACNA1FO60840 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.87■■□□□ 1.09
CACNA1FO60840 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.87■■□□□ 1.09
CACNA1FO60840 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CACNA1FO60840 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CACNA1FO60840 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CACNA1FO60840 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CACNA1FO60840 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
CACNA1FO60840 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CACNA1FO60840 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CACNA1FO60840 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 AC004832.2-201ENST00000426397 482 ntBASIC21.85■■□□□ 1.09
CACNA1FO60840 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.85■■□□□ 1.09
CACNA1FO60840 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.85■■□□□ 1.09
CACNA1FO60840 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CACNA1FO60840 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CACNA1FO60840 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CACNA1FO60840 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.85■■□□□ 1.09
CACNA1FO60840 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CACNA1FO60840 AC018845.2-201ENST00000568326 409 ntBASIC21.85■■□□□ 1.09
CACNA1FO60840 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.84■■□□□ 1.09
CACNA1FO60840 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.84■■□□□ 1.09
CACNA1FO60840 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.84■■□□□ 1.09
CACNA1FO60840 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CACNA1FO60840 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.84■■□□□ 1.09
CACNA1FO60840 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 RHOQP3-201ENST00000437982 621 ntBASIC21.84■■□□□ 1.09
CACNA1FO60840 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CACNA1FO60840 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 REXO1L3P-201ENST00000622202 1288 ntBASIC21.84■■□□□ 1.09
CACNA1FO60840 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CACNA1FO60840 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CACNA1FO60840 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms