Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM210CP-201ENST00000445714 574 ntBASIC16.76■□□□□ 0.27
PCDH7O60245 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 BX276092.5-203ENST00000456199 560 ntBASIC16.76■□□□□ 0.27
PCDH7O60245 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDH7O60245 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDH7O60245 AC005336.2-201ENST00000593183 939 ntBASIC16.76■□□□□ 0.27
PCDH7O60245 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDH7O60245 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH7O60245 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDH7O60245 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDH7O60245 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDH7O60245 FAM86EP-206ENST00000510506 987 ntBASIC16.75■□□□□ 0.27
PCDH7O60245 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH7O60245 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH7O60245 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH7O60245 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 AL138831.2-201ENST00000606564 490 ntBASIC16.75■□□□□ 0.27
PCDH7O60245 AL121672.3-201ENST00000608644 468 ntBASIC16.75■□□□□ 0.27
PCDH7O60245 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDH7O60245 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 AC016396.2-201ENST00000562575 1417 ntBASIC16.75■□□□□ 0.27
PCDH7O60245 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH7O60245 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH7O60245 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH7O60245 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDH7O60245 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDH7O60245 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH7O60245 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 AC099398.1-201ENST00000567919 2776 ntBASIC16.74■□□□□ 0.27
PCDH7O60245 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 CHCHD2P8-201ENST00000429873 447 ntBASIC16.74■□□□□ 0.27
PCDH7O60245 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH7O60245 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH7O60245 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 AC022211.2-201ENST00000585075 2527 ntBASIC16.74■□□□□ 0.27
PCDH7O60245 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 OR6D1P-203ENST00000641209 4860 ntBASIC16.74■□□□□ 0.27
PCDH7O60245 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH7O60245 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH7O60245 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH7O60245 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH7O60245 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH7O60245 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH7O60245 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH7O60245 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms