Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 LINC00304-203ENST00000565008 1864 ntBASIC13.16□□□□□ -0.3
SNAI2O43623 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SNAI2O43623 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 HLA-J-201ENST00000462773 1622 ntBASIC13.16□□□□□ -0.3
SNAI2O43623 NORAD-201ENST00000565493 5339 ntBASIC13.16□□□□□ -0.3
SNAI2O43623 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.16□□□□□ -0.3
SNAI2O43623 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNAI2O43623 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.16□□□□□ -0.3
SNAI2O43623 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNAI2O43623 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.15□□□□□ -0.3
SNAI2O43623 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 AC022898.2-201ENST00000616822 1312 ntBASIC13.15□□□□□ -0.3
SNAI2O43623 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.15□□□□□ -0.3
SNAI2O43623 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms