Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
TO15178 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TO15178 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.14■□□□□ 0.18
TO15178 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TO15178 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
TO15178 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
TO15178 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TO15178 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TO15178 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TO15178 KLF4P1-201ENST00000412782 1185 ntBASIC16.14■□□□□ 0.17
TO15178 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.14■□□□□ 0.17
TO15178 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.14■□□□□ 0.17
TO15178 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
TO15178 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TO15178 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.14■□□□□ 0.17
TO15178 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TO15178 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TO15178 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.14■□□□□ 0.17
TO15178 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TO15178 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TO15178 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.13■□□□□ 0.17
TO15178 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TO15178 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 PCDHB18P-201ENST00000524813 2368 ntBASIC16.13■□□□□ 0.17
TO15178 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.13■□□□□ 0.17
TO15178 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.13■□□□□ 0.17
TO15178 AL020989.1-201ENST00000422979 469 ntBASIC16.13■□□□□ 0.17
TO15178 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.13■□□□□ 0.17
TO15178 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.13■□□□□ 0.17
TO15178 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TO15178 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.13■□□□□ 0.17
TO15178 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TO15178 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.13■□□□□ 0.17
TO15178 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TO15178 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.13■□□□□ 0.17
TO15178 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TO15178 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TO15178 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.12■□□□□ 0.17
TO15178 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TO15178 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.12■□□□□ 0.17
TO15178 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.12■□□□□ 0.17
TO15178 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TO15178 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.12■□□□□ 0.17
TO15178 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.12■□□□□ 0.17
TO15178 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 PRYP5-201ENST00000451909 266 ntBASIC16.12■□□□□ 0.17
TO15178 FGFR3P6-201ENST00000457012 610 ntBASIC16.12■□□□□ 0.17
TO15178 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.12■□□□□ 0.17
TO15178 MTDHP3-201ENST00000594186 672 ntBASIC16.12■□□□□ 0.17
TO15178 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TO15178 AL139288.1-201ENST00000623748 933 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms