Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AC068587.9-201ENST00000641814 219 ntBASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RCC2P6-201ENST00000526625 1557 ntBASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AL391807.1-203ENST00000604392 2365 ntBASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.31■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GRK6P1-201ENST00000400595 1711 ntBASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 LINC00304-203ENST00000565008 1864 ntBASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 AC004854.2-201ENST00000608450 1441 ntBASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BOLA2-SMG1P6H3BVE0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms