Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 ELK2BP-201ENST00000415014 1224 ntBASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 AP000344.2-201ENST00000512987 629 ntBASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 KRT8P47-201ENST00000604727 1398 ntBASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRABD2BA6NFA1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 AL031598.1-201ENST00000561511 1773 ntBASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 IGHV3-65-201ENST00000523210 341 ntBASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRABD2BA6NFA1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AC122714.2-201ENST00000502787 707 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 PDPK2P-202ENST00000562415 1191 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 MIR4745-201ENST00000577608 62 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AC008667.4-201ENST00000607370 168 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AC004877.2-201ENST00000623941 599 ntBASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms