Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 KRT18P27-201ENST00000427733 1299 ntBASIC20.21■□□□□ 0.83
PALM3A6NDB9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.21■□□□□ 0.83
PALM3A6NDB9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 AC008735.5-201ENST00000623544 497 ntBASIC20.21■□□□□ 0.83
PALM3A6NDB9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 AC243591.1-201ENST00000452967 1364 ntBASIC20.21■□□□□ 0.83
PALM3A6NDB9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 RPS2P28-201ENST00000314255 741 ntBASIC20.2■□□□□ 0.82
PALM3A6NDB9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 AC139887.3-201ENST00000568585 713 ntBASIC20.2■□□□□ 0.82
PALM3A6NDB9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 AC004706.3-202ENST00000621574 984 ntBASIC20.2■□□□□ 0.82
PALM3A6NDB9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 AC097637.2-201ENST00000624096 1997 ntBASIC20.2■□□□□ 0.82
PALM3A6NDB9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.2■□□□□ 0.82
PALM3A6NDB9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PALM3A6NDB9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AC116407.3-201ENST00000623905 1129 ntBASIC20.19■□□□□ 0.82
PALM3A6NDB9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AL138688.1-201ENST00000624851 1594 ntBASIC20.19■□□□□ 0.82
PALM3A6NDB9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PALM3A6NDB9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PALM3A6NDB9 NCF1C-201ENST00000438382 1427 ntBASIC20.19■□□□□ 0.82
PALM3A6NDB9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.18■□□□□ 0.82
PALM3A6NDB9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.18■□□□□ 0.82
PALM3A6NDB9 AC073621.1-201ENST00000392730 636 ntBASIC20.18■□□□□ 0.82
PALM3A6NDB9 AC079776.4-201ENST00000511039 504 ntBASIC20.18■□□□□ 0.82
PALM3A6NDB9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.18■□□□□ 0.82
PALM3A6NDB9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.18■□□□□ 0.82
PALM3A6NDB9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.18■□□□□ 0.82
PALM3A6NDB9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 LINC00896-202ENST00000609602 2128 ntBASIC20.18■□□□□ 0.82
PALM3A6NDB9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PALM3A6NDB9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PALM3A6NDB9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.17■□□□□ 0.82
PALM3A6NDB9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PALM3A6NDB9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.17■□□□□ 0.82
PALM3A6NDB9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms