Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 SPDYE13P-201ENST00000445314 798 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 FAM210CP-201ENST00000445714 574 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 AC068472.1-201ENST00000474589 881 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 AC087388.1-201ENST00000571370 1112 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 AC133963.1-201ENST00000504166 1679 ntBASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV1A0A0A0MS02 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 AC011498.5-201ENST00000592027 486 ntBASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 IGHV3-41-201ENST00000613121 348 ntBASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 AL590326.2-201ENST00000625139 305 ntBASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 BX276092.7-203ENST00000637198 1536 ntBASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms