Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 NUS1P2-201ENST00000417358 873 ntBASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 KRT16P4-201ENST00000453883 522 ntBASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 AC012313.10-201ENST00000623509 926 ntBASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 PCDHA12-202ENST00000613593 2588 ntBASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCA3PQ9Y6N3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 AC096633.1-201ENST00000422446 749 ntBASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 AC091304.2-201ENST00000564639 760 ntBASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 BNIP3P18-201ENST00000593976 575 ntBASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCA3PQ9Y6N3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms