Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AC112191.1-201ENST00000523689 701 ntBASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 AL020996.1-203ENST00000536896 2307 ntBASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC2Q9Y5Z7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 FAM86GP-201ENST00000448322 971 ntBASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 AC239800.4-201ENST00000603712 296 ntBASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC2Q9Y5Z7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.21■□□□□ 0.5
HCFC2Q9Y5Z7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 AC092474.2-201ENST00000424288 719 ntBASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HCFC2Q9Y5Z7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 AC093520.2-201ENST00000561830 333 ntBASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC2Q9Y5Z7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms