Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 BASP1P1-201ENST00000430708 665 ntBASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AC087163.2-201ENST00000457299 853 ntBASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AC063926.2-201ENST00000623766 1308 ntBASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ZNRF3Q9ULT6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 FAM58DP-201ENST00000428076 619 ntBASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 AL645728.2-201ENST00000641974 660 ntBASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
ZNRF3Q9ULT6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AL135999.2-201ENST00000622438 1686 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 TUBB3P1-201ENST00000405796 1332 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AC236430.1-201ENST00000402231 743 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 TFAMP1-201ENST00000412727 736 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 KRT18P32-201ENST00000424695 1287 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 RN7SL589P-201ENST00000481268 310 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AC087641.1-201ENST00000557561 1021 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AC243562.1-201ENST00000560672 389 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 AP001059.3-201ENST00000619053 235 ntBASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF3Q9ULT6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNRF3Q9ULT6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNRF3Q9ULT6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNRF3Q9ULT6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNRF3Q9ULT6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNRF3Q9ULT6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 MIR943-201ENST00000401286 94 ntBASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 AC002472.2-201ENST00000442739 958 ntBASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF3Q9ULT6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms