Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC108860.2-201ENST00000562760 2183 ntBASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
GTF3C4Q9UKN8 HLA-J-201ENST00000462773 1622 ntBASIC18.89■□□□□ 0.62
GTF3C4Q9UKN8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GTF3C4Q9UKN8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 FDX1P1-201ENST00000449115 551 ntBASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 AC009078.2-202ENST00000463353 338 ntBASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 AC138932.1-201ENST00000534164 6830 ntBASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 KRT8P10-201ENST00000450021 1447 ntBASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF3C4Q9UKN8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 REXO1L11P-201ENST00000620964 1927 ntBASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 AP001269.4-201ENST00000609611 512 ntBASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF3C4Q9UKN8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 LINC01451-201ENST00000623792 534 ntBASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF3C4Q9UKN8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
GTF3C4Q9UKN8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms