Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 AC107918.4-202ENST00000641623 219 ntBASIC18.73■□□□□ 0.59
SIX4Q9UIU6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 AL138688.1-201ENST00000624851 1594 ntBASIC18.72■□□□□ 0.59
SIX4Q9UIU6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX4Q9UIU6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 AC005332.8-201ENST00000622750 2735 ntBASIC18.71■□□□□ 0.59
SIX4Q9UIU6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 OR7E14P-202ENST00000530490 1290 ntBASIC18.71■□□□□ 0.59
SIX4Q9UIU6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 AC097637.2-201ENST00000624096 1997 ntBASIC18.71■□□□□ 0.59
SIX4Q9UIU6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX4Q9UIU6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 LAGE3P1-201ENST00000425356 484 ntBASIC18.7■□□□□ 0.58
SIX4Q9UIU6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 AP001005.1-201ENST00000571755 1248 ntBASIC18.7■□□□□ 0.58
SIX4Q9UIU6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 AL589182.2-201ENST00000619332 1049 ntBASIC18.7■□□□□ 0.58
SIX4Q9UIU6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.7■□□□□ 0.58
SIX4Q9UIU6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX4Q9UIU6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX4Q9UIU6 AC243591.1-201ENST00000452967 1364 ntBASIC18.69■□□□□ 0.58
SIX4Q9UIU6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms