Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 AL662799.1-202ENST00000614205 422 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 AC135776.1-201ENST00000319817 2481 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 AC107918.2-201ENST00000530817 355 ntBASIC18.41■□□□□ 0.54
CHD7Q9P2D1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 AP000997.3-201ENST00000623333 2250 ntBASIC18.41■□□□□ 0.54
CHD7Q9P2D1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD7Q9P2D1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 HILS1-202ENST00000545329 423 ntBASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC026120.1-201ENST00000611536 926 ntBASIC18.4■□□□□ 0.54
CHD7Q9P2D1 IGHV3-72-202ENST00000621503 303 ntBASIC18.4■□□□□ 0.54
CHD7Q9P2D1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHD7Q9P2D1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHD7Q9P2D1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHD7Q9P2D1 AC027307.3-201ENST00000594262 1100 ntBASIC18.39■□□□□ 0.54
CHD7Q9P2D1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.39■□□□□ 0.54
CHD7Q9P2D1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.39■□□□□ 0.54
CHD7Q9P2D1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms