Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.3
SPHK1Q9NYA1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPHK1Q9NYA1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.89■□□□□ 0.3
SPHK1Q9NYA1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 HLA-J-201ENST00000462773 1622 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 GNAS-203ENST00000306120 1878 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AC003669.1-201ENST00000334569 611 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AL020989.1-201ENST00000422979 469 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 HNRNPDP1-201ENST00000439535 754 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AC018712.1-201ENST00000455767 687 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 STK19B-204ENST00000512515 211 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AC025062.2-201ENST00000605477 670 ntBASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK1Q9NYA1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 AC133963.1-201ENST00000504166 1679 ntBASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 HTR7P1-202ENST00000624664 4411 ntBASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 AC073648.2-201ENST00000510116 352 ntBASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 MTDHP4-201ENST00000600287 670 ntBASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK1Q9NYA1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 AC009336.1-201ENST00000608941 1553 ntBASIC16.87■□□□□ 0.29
SPHK1Q9NYA1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms