Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AL023284.2-201ENST00000405850 579 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 RPS3AP6-201ENST00000484430 795 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 RPL6P8-201ENST00000490136 843 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AC090912.3-201ENST00000609775 533 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 GPAT2P1-201ENST00000444924 1672 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 TEX21P-204ENST00000641479 1693 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 FBXL21-201ENST00000297158 1305 ntBASIC20.47■□□□□ 0.87
RNF216Q9NWF9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF216Q9NWF9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 KRT8P7-201ENST00000533003 1432 ntBASIC20.46■□□□□ 0.87
RNF216Q9NWF9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 Z80107.1-201ENST00000436830 412 ntBASIC20.46■□□□□ 0.87
RNF216Q9NWF9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AC089999.1-201ENST00000460336 374 ntBASIC20.46■□□□□ 0.87
RNF216Q9NWF9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AL031667.3-201ENST00000620124 655 ntBASIC20.46■□□□□ 0.87
RNF216Q9NWF9 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AL807752.1-201ENST00000395082 1322 ntBASIC20.46■□□□□ 0.87
RNF216Q9NWF9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF216Q9NWF9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 MTCO1P8-201ENST00000416914 1523 ntBASIC20.45■□□□□ 0.86
RNF216Q9NWF9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 DUSP5P1-201ENST00000441325 1139 ntBASIC20.45■□□□□ 0.86
RNF216Q9NWF9 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF216Q9NWF9 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms