Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC073310.1-201ENST00000423226 1033 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC018712.1-201ENST00000455767 687 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 STK19B-204ENST00000512515 211 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC109462.3-201ENST00000573934 613 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC006557.2-201ENST00000592985 1240 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AL031008.1-201ENST00000619963 541 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 HLA-J-201ENST00000462773 1622 ntBASIC16.12■□□□□ 0.17
RYDENQ9NUL5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 PPP2R2DP1-201ENST00000420526 637 ntBASIC16.12■□□□□ 0.17
RYDENQ9NUL5 FAM197Y8-203ENST00000450145 560 ntBASIC16.12■□□□□ 0.17
RYDENQ9NUL5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 AL132657.2-201ENST00000564417 358 ntBASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 AC006116.8-202ENST00000587620 1550 ntBASIC16.12■□□□□ 0.17
RYDENQ9NUL5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RYDENQ9NUL5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC026396.1-201ENST00000419388 421 ntBASIC16.11■□□□□ 0.17
RYDENQ9NUL5 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 FDX1P1-201ENST00000449115 551 ntBASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC114495.2-201ENST00000452686 437 ntBASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RYDENQ9NUL5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms