Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 AC016396.2-201ENST00000562575 1417 ntBASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 PKD1P1-201ENST00000458669 6805 ntBASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 COX11P1-201ENST00000489116 835 ntBASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 AC116562.4-202ENST00000641738 218 ntBASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 IER3-202ENST00000376377 1350 ntBASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCM2LQ9NUG4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 FAM86EP-206ENST00000510506 987 ntBASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 AL603756.1-201ENST00000606511 2163 ntBASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.72■□□□□ 0.27
CCM2LQ9NUG4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AC008894.3-201ENST00000624324 3103 ntBASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 CA15P1-201ENST00000481698 905 ntBASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 MIR3180-4-201ENST00000582223 153 ntBASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 MIR4674-201ENST00000582457 87 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms