Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 AL445228.2-201ENST00000605589 952 ntBASIC17.49■□□□□ 0.39
TREX1Q9NSU2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 AL121761.2-201ENST00000598007 1648 ntBASIC17.49■□□□□ 0.39
TREX1Q9NSU2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 INTS4P1-201ENST00000438455 1935 ntBASIC17.49■□□□□ 0.39
TREX1Q9NSU2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TREX1Q9NSU2 AC009053.2-201ENST00000563701 2365 ntBASIC17.48■□□□□ 0.39
TREX1Q9NSU2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 LINC00265-3P-201ENST00000447588 903 ntBASIC17.48■□□□□ 0.39
TREX1Q9NSU2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 AC069148.1-201ENST00000608741 768 ntBASIC17.48■□□□□ 0.39
TREX1Q9NSU2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TREX1Q9NSU2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AD000864.1-201ENST00000624076 2295 ntBASIC17.47■□□□□ 0.39
TREX1Q9NSU2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC093525.9-201ENST00000624961 1746 ntBASIC17.47■□□□□ 0.39
TREX1Q9NSU2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC132938.5-201ENST00000624980 1813 ntBASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TREX1Q9NSU2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TREX1Q9NSU2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TREX1Q9NSU2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms