Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.12■□□□□ 0.17
CHD8Q9HCK8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.12■□□□□ 0.17
CHD8Q9HCK8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 ZNF767P-206ENST00000513792 565 ntBASIC16.12■□□□□ 0.17
CHD8Q9HCK8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 AC008738.7-201ENST00000609744 511 ntBASIC16.12■□□□□ 0.17
CHD8Q9HCK8 SPDYE12P-201ENST00000618416 771 ntBASIC16.12■□□□□ 0.17
CHD8Q9HCK8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHD8Q9HCK8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 AC103810.3-201ENST00000583567 96 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 LINC01006-201ENST00000333319 2292 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.11■□□□□ 0.17
CHD8Q9HCK8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD8Q9HCK8 AL032819.2-201ENST00000624543 2162 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 STK25P1-201ENST00000585406 838 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 BTBD7P1-201ENST00000447253 1453 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 AC007952.6-201ENST00000573168 2673 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 AC003957.1-201ENST00000625108 2673 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 HLA-V-204ENST00000476601 1289 ntBASIC16.1■□□□□ 0.17
CHD8Q9HCK8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD8Q9HCK8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 SLC7A15P-201ENST00000424028 1363 ntBASIC16.09■□□□□ 0.17
CHD8Q9HCK8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms