Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 KRT18P65-201ENST00000439811 1286 ntBASIC21.56■■□□□ 1.04
UPF2Q9HAU5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 AC113404.2-201ENST00000507884 177 ntBASIC21.56■■□□□ 1.04
UPF2Q9HAU5 C2orf69P3-201ENST00000565542 1120 ntBASIC21.56■■□□□ 1.04
UPF2Q9HAU5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 AC105020.1-201ENST00000435356 2205 ntBASIC21.56■■□□□ 1.04
UPF2Q9HAU5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 PVRIG2P-201ENST00000435460 978 ntBASIC21.55■■□□□ 1.04
UPF2Q9HAU5 UBE2SP1-201ENST00000450587 669 ntBASIC21.55■■□□□ 1.04
UPF2Q9HAU5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 MIR3917-201ENST00000580971 93 ntBASIC21.55■■□□□ 1.04
UPF2Q9HAU5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF2Q9HAU5 PCDHB19P-201ENST00000570871 2371 ntBASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 LYSMD4-203ENST00000378904 2122 ntBASIC21.54■■□□□ 1.04
UPF2Q9HAU5 ITM2C-210ENST00000620962 501 ntBASIC21.54■■□□□ 1.04
UPF2Q9HAU5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 BX276092.7-203ENST00000637198 1536 ntBASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF2Q9HAU5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 RBM17P1-201ENST00000453646 1190 ntBASIC21.53■■□□□ 1.04
UPF2Q9HAU5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 AC142381.4-202ENST00000563973 229 ntBASIC21.53■■□□□ 1.04
UPF2Q9HAU5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
UPF2Q9HAU5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms