Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.8■□□□□ 0.28
PIF1Q9H611 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PIF1Q9H611 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 AC009947.2-201ENST00000444014 672 ntBASIC16.8■□□□□ 0.28
PIF1Q9H611 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.8■□□□□ 0.28
PIF1Q9H611 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PIF1Q9H611 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.8■□□□□ 0.28
PIF1Q9H611 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PIF1Q9H611 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PIF1Q9H611 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PIF1Q9H611 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PIF1Q9H611 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PIF1Q9H611 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.8■□□□□ 0.28
PIF1Q9H611 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
PIF1Q9H611 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.8■□□□□ 0.28
PIF1Q9H611 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
PIF1Q9H611 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PIF1Q9H611 AC060834.1-201ENST00000443027 2032 ntBASIC16.79■□□□□ 0.28
PIF1Q9H611 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.79■□□□□ 0.28
PIF1Q9H611 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 AC116407.2-201ENST00000613639 860 ntBASIC16.79■□□□□ 0.28
PIF1Q9H611 AC073912.3-201ENST00000624414 853 ntBASIC16.79■□□□□ 0.28
PIF1Q9H611 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 AGGF1P2-201ENST00000426656 2106 ntBASIC16.79■□□□□ 0.28
PIF1Q9H611 PCDHB19P-201ENST00000570871 2371 ntBASIC16.79■□□□□ 0.28
PIF1Q9H611 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
PIF1Q9H611 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PIF1Q9H611 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PIF1Q9H611 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PIF1Q9H611 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PIF1Q9H611 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PIF1Q9H611 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PIF1Q9H611 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.78■□□□□ 0.28
PIF1Q9H611 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.78■□□□□ 0.28
PIF1Q9H611 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.78■□□□□ 0.28
PIF1Q9H611 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 TSPY15P-201ENST00000457163 923 ntBASIC16.78■□□□□ 0.28
PIF1Q9H611 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.78■□□□□ 0.28
PIF1Q9H611 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.78■□□□□ 0.28
PIF1Q9H611 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.78■□□□□ 0.28
PIF1Q9H611 AL512604.3-201ENST00000569583 964 ntBASIC16.78■□□□□ 0.28
PIF1Q9H611 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.78■□□□□ 0.28
PIF1Q9H611 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PIF1Q9H611 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms