Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 KRT18P13-201ENST00000400056 1290 ntBASIC18.9■□□□□ 0.62
NXF3Q9H4D5 LINC00982-205ENST00000420957 435 ntBASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AC092865.5-201ENST00000545435 363 ntBASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
NXF3Q9H4D5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
NXF3Q9H4D5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.89■□□□□ 0.62
NXF3Q9H4D5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NXF3Q9H4D5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 AC046185.3-201ENST00000623228 1824 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 LINC00304-203ENST00000565008 1864 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 AC108073.2-201ENST00000464002 357 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 RPS15P9-201ENST00000494093 319 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 AL353135.1-201ENST00000606729 504 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 GPALPP1-207ENST00000611650 899 ntBASIC18.89■□□□□ 0.61
NXF3Q9H4D5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NXF3Q9H4D5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 BX842568.4-201ENST00000421222 227 ntBASIC18.88■□□□□ 0.61
NXF3Q9H4D5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.88■□□□□ 0.61
NXF3Q9H4D5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms