Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AL023806.1-201ENST00000603994 1649 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 PCDHA12-202ENST00000613593 2588 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AL121894.2-201ENST00000602977 491 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 IFNL4P1-201ENST00000607083 540 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AC106820.2-201ENST00000563775 3264 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN3Q9H347 AC125634.1-201ENST00000438758 1403 ntBASIC16.28■□□□□ 0.2
UBQLN3Q9H347 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 KRT16P4-201ENST00000453883 522 ntBASIC16.27■□□□□ 0.2
UBQLN3Q9H347 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 RN7SL510P-201ENST00000581311 263 ntBASIC16.27■□□□□ 0.2
UBQLN3Q9H347 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.27■□□□□ 0.2
UBQLN3Q9H347 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 AC114341.1-201ENST00000618070 349 ntBASIC16.27■□□□□ 0.2
UBQLN3Q9H347 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UBQLN3Q9H347 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN3Q9H347 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 TPM4P1-201ENST00000436100 807 ntBASIC16.26■□□□□ 0.19
UBQLN3Q9H347 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 AC133963.1-201ENST00000504166 1679 ntBASIC16.26■□□□□ 0.19
UBQLN3Q9H347 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN3Q9H347 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms