Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC68Q9H2F9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 AL049597.2-201ENST00000565575 961 ntBASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 LINC00304-203ENST00000565008 1864 ntBASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC68Q9H2F9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 SPDYE13P-201ENST00000445314 798 ntBASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 AC009053.2-201ENST00000563701 2365 ntBASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC68Q9H2F9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 TSPY22P-201ENST00000427496 604 ntBASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms