Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD4Q9H0A8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 BX276092.7-203ENST00000637198 1536 ntBASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.53■□□□□ 0.08
COMMD4Q9H0A8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 MIR4497-201ENST00000583208 89 ntBASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 AL157888.1-201ENST00000631930 593 ntBASIC15.52■□□□□ 0.08
COMMD4Q9H0A8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
COMMD4Q9H0A8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms