Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 TNRC18P3-201ENST00000441896 2691 ntBASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD3Q9BV44 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 AL137013.1-201ENST00000432946 1228 ntBASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 PVRIG2P-201ENST00000435460 978 ntBASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD3Q9BV44 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 AP000523.1-201ENST00000398242 1049 ntBASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 AC113347.1-201ENST00000413321 391 ntBASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 DDX43P3-201ENST00000441064 443 ntBASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 LINC01023-201ENST00000606054 436 ntBASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD3Q9BV44 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms