Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 TPM4P1-201ENST00000436100 807 ntBASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 AP000867.4-201ENST00000641616 219 ntBASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.27■□□□□ 0.36
CCM2Q9BSQ5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2Q9BSQ5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 AC004870.1-201ENST00000315132 882 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 RBM17P3-201ENST00000417687 1192 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 FAAHP1-202ENST00000446499 1238 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 UNC93B7-201ENST00000509439 705 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 AC073592.5-201ENST00000624854 528 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 AP005117.1-201ENST00000584346 1413 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCM2Q9BSQ5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCM2Q9BSQ5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms