Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.02■□□□□ 0.8
ARID3AQ99856 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.02■□□□□ 0.8
ARID3AQ99856 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ARID3AQ99856 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 MIR3180-5-201ENST00000583743 153 ntBASIC20.02■□□□□ 0.8
ARID3AQ99856 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ARID3AQ99856 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ARID3AQ99856 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARID3AQ99856 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
ARID3AQ99856 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.79
ARID3AQ99856 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARID3AQ99856 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARID3AQ99856 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ARID3AQ99856 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
ARID3AQ99856 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ARID3AQ99856 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ARID3AQ99856 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ARID3AQ99856 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ARID3AQ99856 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 LINC01023-201ENST00000606054 436 ntBASIC20.01■□□□□ 0.79
ARID3AQ99856 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.01■□□□□ 0.79
ARID3AQ99856 AC099343.3-201ENST00000605834 2503 ntBASIC20.01■□□□□ 0.79
ARID3AQ99856 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARID3AQ99856 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ARID3AQ99856 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 DOC2GP-204ENST00000639052 2548 ntBASIC20■□□□□ 0.79
ARID3AQ99856 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20■□□□□ 0.79
ARID3AQ99856 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 MIR564-202ENST00000385049 94 ntBASIC20■□□□□ 0.79
ARID3AQ99856 MIR1224-201ENST00000408193 85 ntBASIC20■□□□□ 0.79
ARID3AQ99856 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20■□□□□ 0.79
ARID3AQ99856 GXYLT1P6-201ENST00000456472 1187 ntBASIC20■□□□□ 0.79
ARID3AQ99856 AC128688.1-201ENST00000487626 519 ntBASIC20■□□□□ 0.79
ARID3AQ99856 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20■□□□□ 0.79
ARID3AQ99856 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20■□□□□ 0.79
ARID3AQ99856 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
ARID3AQ99856 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ARID3AQ99856 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ARID3AQ99856 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARID3AQ99856 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20■□□□□ 0.79
ARID3AQ99856 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC19.99■□□□□ 0.79
ARID3AQ99856 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.99■□□□□ 0.79
ARID3AQ99856 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARID3AQ99856 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms