Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL13Q99616 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCL13Q99616 DUSP5P1-201ENST00000441325 1139 ntBASIC14.71□□□□□ -0.05
CCL13Q99616 AC132008.2-207ENST00000454517 770 ntBASIC14.71□□□□□ -0.05
CCL13Q99616 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.71□□□□□ -0.05
CCL13Q99616 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL13Q99616 LINC01711-201ENST00000598340 967 ntBASIC14.71□□□□□ -0.05
CCL13Q99616 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL13Q99616 LINC01451-201ENST00000623792 534 ntBASIC14.71□□□□□ -0.05
CCL13Q99616 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.71□□□□□ -0.05
CCL13Q99616 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 LINC00304-203ENST00000565008 1864 ntBASIC14.71□□□□□ -0.05
CCL13Q99616 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.71□□□□□ -0.05
CCL13Q99616 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CCL13Q99616 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CCL13Q99616 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CCL13Q99616 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCL13Q99616 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL13Q99616 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCL13Q99616 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
CCL13Q99616 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL13Q99616 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.7□□□□□ -0.06
CCL13Q99616 IGHV3-52-201ENST00000519770 353 ntBASIC14.7□□□□□ -0.06
CCL13Q99616 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.7□□□□□ -0.06
CCL13Q99616 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.7□□□□□ -0.06
CCL13Q99616 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.7□□□□□ -0.06
CCL13Q99616 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.7□□□□□ -0.06
CCL13Q99616 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL13Q99616 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCL13Q99616 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCL13Q99616 HLA-J-201ENST00000462773 1622 ntBASIC14.7□□□□□ -0.06
CCL13Q99616 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.7□□□□□ -0.06
CCL13Q99616 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 KRT8P10-201ENST00000450021 1447 ntBASIC14.69□□□□□ -0.06
CCL13Q99616 AC133963.1-201ENST00000504166 1679 ntBASIC14.69□□□□□ -0.06
CCL13Q99616 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL13Q99616 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL13Q99616 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL13Q99616 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.69□□□□□ -0.06
CCL13Q99616 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms