Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPENQ96T58 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.68■□□□□ 0.1
SPENQ96T58 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.68■□□□□ 0.1
SPENQ96T58 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
SPENQ96T58 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.67■□□□□ 0.1
SPENQ96T58 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SPENQ96T58 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.67■□□□□ 0.1
SPENQ96T58 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.67■□□□□ 0.1
SPENQ96T58 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPENQ96T58 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.67■□□□□ 0.1
SPENQ96T58 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SPENQ96T58 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPENQ96T58 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.67■□□□□ 0.1
SPENQ96T58 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.67■□□□□ 0.1
SPENQ96T58 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.67■□□□□ 0.1
SPENQ96T58 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.67■□□□□ 0.1
SPENQ96T58 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.67■□□□□ 0.1
SPENQ96T58 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPENQ96T58 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.66■□□□□ 0.1
SPENQ96T58 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.66■□□□□ 0.1
SPENQ96T58 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.66■□□□□ 0.1
SPENQ96T58 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 AL135744.1-201ENST00000565098 629 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.66■□□□□ 0.1
SPENQ96T58 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPENQ96T58 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.66■□□□□ 0.1
SPENQ96T58 TIMM8BP1-201ENST00000452384 211 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 SERBP1P5-201ENST00000510079 1181 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPENQ96T58 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPENQ96T58 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.66■□□□□ 0.1
SPENQ96T58 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 AC125807.1-201ENST00000483097 614 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.66■□□□□ 0.1
SPENQ96T58 ACTL9-202ENST00000612068 1252 ntBASIC15.66■□□□□ 0.1
SPENQ96T58 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPENQ96T58 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.66■□□□□ 0.1
SPENQ96T58 AC009336.1-201ENST00000608941 1553 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms