Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 PRSS29P-201ENST00000440800 595 ntBASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 AL691403.2-201ENST00000618460 490 ntBASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 AL138688.1-201ENST00000624851 1594 ntBASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 ELL2P1-201ENST00000413990 1906 ntBASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 AC254562.1-201ENST00000417586 456 ntBASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 HMGN1P19-201ENST00000436976 333 ntBASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 AL513480.1-201ENST00000451731 511 ntBASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 AP000344.2-201ENST00000512987 629 ntBASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK5RAP2Q96SN8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 VN2R19P-201ENST00000442399 1052 ntBASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 AC099522.2-201ENST00000607001 744 ntBASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK5RAP2Q96SN8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.45■□□□□ 0.87
CDK5RAP2Q96SN8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CDK5RAP2Q96SN8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.45■□□□□ 0.87
CDK5RAP2Q96SN8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK5RAP2Q96SN8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 METTL21AP1-201ENST00000438852 635 ntBASIC20.44■□□□□ 0.86
CDK5RAP2Q96SN8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms