Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.75■□□□□ 0.27
ITCHQ96J02 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 AL031432.5-201ENST00000641059 760 ntBASIC16.75■□□□□ 0.27
ITCHQ96J02 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ITCHQ96J02 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.75■□□□□ 0.27
ITCHQ96J02 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ITCHQ96J02 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ITCHQ96J02 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.74■□□□□ 0.27
ITCHQ96J02 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ITCHQ96J02 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.74■□□□□ 0.27
ITCHQ96J02 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ITCHQ96J02 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.74■□□□□ 0.27
ITCHQ96J02 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
ITCHQ96J02 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 LINC01311-201ENST00000565162 1445 ntBASIC16.73■□□□□ 0.27
ITCHQ96J02 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.73■□□□□ 0.27
ITCHQ96J02 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.73■□□□□ 0.27
ITCHQ96J02 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.73■□□□□ 0.27
ITCHQ96J02 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ITCHQ96J02 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITCHQ96J02 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.72■□□□□ 0.27
ITCHQ96J02 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ITCHQ96J02 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ITCHQ96J02 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.72■□□□□ 0.27
ITCHQ96J02 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 FAM8A6P-201ENST00000407496 1135 ntBASIC16.72■□□□□ 0.27
ITCHQ96J02 HLA-F-220ENST00000434407 884 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms