Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 AKR1C7P-201ENST00000305623 895 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 KRT18P65-201ENST00000439811 1286 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 AC106795.1-205ENST00000512851 1056 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 REXO1L6P-202ENST00000619970 1078 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 AL022342.1-201ENST00000400363 863 ntBASIC20.85■□□□□ 0.93
DDX11Q96FC9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 AC141586.5-201ENST00000624546 2050 ntBASIC20.85■□□□□ 0.93
DDX11Q96FC9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DDX11Q96FC9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX11Q96FC9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX11Q96FC9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX11Q96FC9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.84■□□□□ 0.93
DDX11Q96FC9 AL591684.3-201ENST00000605187 298 ntBASIC20.84■□□□□ 0.93
DDX11Q96FC9 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.84■□□□□ 0.93
DDX11Q96FC9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX11Q96FC9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX11Q96FC9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX11Q96FC9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 AL645608.8-201ENST00000606034 2086 ntBASIC20.83■□□□□ 0.93
DDX11Q96FC9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 TSPY12P-201ENST00000421279 868 ntBASIC20.83■□□□□ 0.93
DDX11Q96FC9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 AF238378.1-201ENST00000526806 358 ntBASIC20.83■□□□□ 0.93
DDX11Q96FC9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX11Q96FC9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX11Q96FC9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DDX11Q96FC9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
DDX11Q96FC9 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.83■□□□□ 0.92
DDX11Q96FC9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX11Q96FC9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX11Q96FC9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX11Q96FC9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX11Q96FC9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX11Q96FC9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms