Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 VENTXP7-201ENST00000475503 772 ntBASIC18.57■□□□□ 0.56
TRIM11Q96F44 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 FAM220CP-201ENST00000395253 831 ntBASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC103564.2-201ENST00000432853 1299 ntBASIC18.56■□□□□ 0.56
TRIM11Q96F44 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC111152.3-201ENST00000569699 673 ntBASIC18.56■□□□□ 0.56
TRIM11Q96F44 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC019129.2-201ENST00000609837 1235 ntBASIC18.56■□□□□ 0.56
TRIM11Q96F44 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AC116353.5-201ENST00000638148 1699 ntBASIC18.56■□□□□ 0.56
TRIM11Q96F44 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM11Q96F44 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM11Q96F44 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 AL121672.3-201ENST00000608644 468 ntBASIC18.55■□□□□ 0.56
TRIM11Q96F44 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM11Q96F44 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM11Q96F44 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 AL031133.1-201ENST00000406807 723 ntBASIC18.54■□□□□ 0.56
TRIM11Q96F44 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM11Q96F44 AL845331.1-201ENST00000424978 1190 ntBASIC18.54■□□□□ 0.56
TRIM11Q96F44 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 BX276092.5-203ENST00000456199 560 ntBASIC18.54■□□□□ 0.56
TRIM11Q96F44 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM11Q96F44 AC109462.3-201ENST00000573934 613 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms