Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 DOC2GP-204ENST00000639052 2548 ntBASIC16.71■□□□□ 0.27
LRRC58Q96CX6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 TSPY7P-201ENST00000431358 1114 ntBASIC16.71■□□□□ 0.27
LRRC58Q96CX6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 AL139327.4-201ENST00000612362 153 ntBASIC16.71■□□□□ 0.27
LRRC58Q96CX6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC58Q96CX6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC58Q96CX6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC58Q96CX6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC58Q96CX6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 AL603756.1-201ENST00000606511 2163 ntBASIC16.7■□□□□ 0.26
LRRC58Q96CX6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 AC009154.2-201ENST00000621177 724 ntBASIC16.7■□□□□ 0.26
LRRC58Q96CX6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRRC58Q96CX6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 AC112698.1-201ENST00000510299 916 ntBASIC16.69■□□□□ 0.26
LRRC58Q96CX6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms